miRNA identification - miRNA prediction (Aug/13/2008 )
I like to know is their any web server could identify the miRNA in 3'UTR sequence,
In most of the mRNAs with 3 prime UTRs, you can find Micro RNA binding sites called MREs (microRNA recognition Elements). This can be searched in databases like microRNA.org, miRbase, Targetscan, etc.
Here are a few links to get you started:
http://pictar.bio.nyu.edu/ (site down when I checked)