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autoclave PCR tubes... - (May/16/2007 )

Does anyone know.....When autoclaving PCR tubes and microcentrifuge tubes, is it best to shut the lids or leave them open (when in a sealed container)?
Thanks!

-evejoss-

QUOTE (evejoss @ May 16 2007, 01:23 AM)
Does anyone know.....When autoclaving PCR tubes and microcentrifuge tubes, is it best to shut the lids or leave them open (when in a sealed container)?
Thanks!



I leave them open and have never had a problem

-auldmok-

We in our lab also leave everything open

-money-

keep them open in the original bag that you close tightly.
they are sold DNase and RNase free ,you don't need to autoclave them..
Don't put your hands in the bag to catche them but rather let them fall from it, wear gloves anytime you want to take some. and that's it.

-minus-

QUOTE (evejoss @ May 16 2007, 02:23 AM)
Does anyone know.....When autoclaving PCR tubes and microcentrifuge tubes, is it best to shut the lids or leave them open (when in a sealed container)?
Thanks!

leave them open

-T. reesei-

QUOTE (minus @ May 16 2007, 08:00 AM)
they are sold DNase and RNase free ,you don't need to autoclave them..


I thought I was the only one who thought that way...everyone else I know autoclaves them. My thinking has always been that they're already sterile and in a sealed bag, and what if there is something wrong with the autoclave that you don't know about?

-Cassio-

QUOTE
I thought I was the only one who thought that way...everyone else I know autoclaves them. My thinking has always been that they're already sterile and in a sealed bag, and what if there is something wrong with the autoclave that you don't know about?



i also think in the same way, but its my lab's practice to autoclave the sterile tubes.........so i also follow them or more clearly... i have to follow them. may be they are more confident about their autoclave procedure. dry.gif

-T. reesei-

I guess better be safe than sorry. Just autoclave them, it wouldnt take that long right?

-timjim-

I always assumed that we were supposed to autoclave them... then I started wondering, does an autoclave really remove contaminating DNA? So I researched it, and I found this paper!
Autoclave method for rapid preparation of bacterial PCR-template DNA.

QUOTE
An autoclave method for preparing bacterial DNA for PCR template is presented, it eliminates the use of detergents, organic solvents, and mechanical cellular disruption approaches, thereby significantly reducing processing time and costs while increasing reproducibility. Bacteria are lysed by rapid heating and depressurization in an autoclave. The lysate, cleared by microcentrifugation, was either used directly in the PCR reaction, or concentrated by ultrafiltration. This approach was compared with seven established methods of DNA template preparation from four bacterial sources which included boiling Triton X-100 and SDS, bead beating, lysozyme/proteinase K, and CTAB lysis method components. Bacteria examined were Enterococcus and Escherichia coli, a natural marine bacterial community and an Antarctic cyanobacterial-mat. DNAs were tested for their suitability as PCR templates by repetitive element random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE) analysis. The autoclave method produced PCR amplifiable template comparable or superior to the other methods, with greater reproducibility, much shorter processing time, and at a significantly lower cost.


So... my attitude is now "keep that filthy autoclave away from my PCR tubes!" and I only autoclave stuff for bacterial work. I don't autoclave general-purpose pipette tips and tubes either. They are theoretically cleaner when they come straight out of the bag than after going through the autoclave.

Incidentally, that paper seems like a pretty interesting protocol! I haven't tried it though.

-Zouden-