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DNA linear transformation failure - (Nov/21/2006 )

We are trying to do a DNA linear transformation using a 5.5kb PCR product (gene promoter+lacZ+cat gene+ 40bp of putA homology sites) in Salmonella typhimurium. The problem is we are getting no transformants. We tried adjusting the volume of arabinose and DNA during the process, but still it failed. Anothet student spent 4 months trying to get a transformant but didnt succeed. Now, the task is mine. sad.gif I tried repeating all the experiments and already spent 2 weeks for it but still no success. I dont know where the mistake is.

Our goal is to study the gene regulation of that particular gene. Anyone who has experience using the same technique pls enlighten me. My motivation is getting low. sad.gif

Thanks

-arvinsign-

QUOTE (arvinsign @ Nov 22 2006, 01:10 PM)
We are trying to do a DNA linear transformation using a 5.5kb PCR product (gene promoter+lacZ+cat gene+ 40bp of putA homology sites) in Salmonella typhimurium. The problem is we are getting no transformants. We tried adjusting the volume of arabinose and DNA during the process, but still it failed. Anothet student spent 4 months trying to get a transformant but didnt succeed. Now, the task is mine. sad.gif I tried repeating all the experiments and already spent 2 weeks for it but still no success. I dont know where the mistake is.

Our goal is to study the gene regulation of that particular gene. Anyone who has experience using the same technique pls enlighten me. My motivation is getting low. sad.gif

Thanks


I haven't used a putA system but linear DNA would be very susceptible to exo-nuclease degradation. Is it possible that a nuclease exists in the periplasmid space resulting in degradation of the DNA? I have read an article that utilised osmotic shock to clear out the periplasmic space which improved transformation significantly. This was due to a nuclease in the periplasmic space.

-ML1975-

Thanks for the reply. Ill look into that

-arvinsign-