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precipitation of nuclear proteins during GST pull down assay - (Nov/17/2006 )

I have been trying to do GST pull down assays using nuclear fractions. I have been doing overnight incubations with the GT fusion proteins. However the next day, invariably, my nuclear proteins precipitate. I thought this may have been due to the high salt present in my buffer, so I dialyze against 1X PBS for an hour and then concentrate the solution and resuspend the concentrated mix of proteins in appropriate buffer (low salt-120 mM KCL). Still no use.

Any facing similar problems? Any advice is appreciated.

HS

-h.s-

QUOTE (h.s @ Nov 17 2006, 03:15 PM)
I have been trying to do GST pull down assays using nuclear fractions. I have been doing overnight incubations with the GT fusion proteins. However the next day, invariably, my nuclear proteins precipitate. I thought this may have been due to the high salt present in my buffer, so I dialyze against 1X PBS for an hour and then concentrate the solution and resuspend the concentrated mix of proteins in appropriate buffer (low salt-120 mM KCL). Still no use.

Any facing similar problems? Any advice is appreciated.

HS


Try dialysing in the presence of 1M NDSB 201 (1-(3-pyridinio) propanesulfonate. Will help in the solubilisation of sparingly soluble proteins without denaturing them.

-Paul T-