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SDS-PAGE Dimer! - (May/23/2006 )

Hi,everyone:

i was doing some Western Blotting(SDS-PAGE) to test poly-antibodies against some transcript factors.always there were some high-weight bands,about double MW of the monomer.somebody else tell me they are dimers.

i need a perfect result to show only one correct band at right MW,

So,Is there any methods to remove the dimer?
should I change the conditions of treating samples? for example , boiling to 60 degree C and cool down slowly?
Or doing the non-reduced PAGE?
Or subcelluar separation ?
Or change the detergent,for example ,Triton X-100?


And ,i don't think it was glycoprotein,although many dimers are found glycosylated,it is unusual to found transcript factors glycosylated,isn't it?


Thanks for any response

-wakakaka-

May be you did'nt reduce well your protein, that's why you still have dimer.
You might prepare fresh loadiing buffer,and boil 5 minutes (90-95°C).
Usually people prepare their buffer with 1% beta-mercaptoethanol, but some proteins have quite a lot of cystein, and you should then increase to 5%.

-Missele-

QUOTE (wakakaka @ May 23 2006, 06:01 PM)
Hi,everyone:

i was doing some Western Blotting(SDS-PAGE) to test poly-antibodies against some transcript factors.always there were some high-weight bands,about double MW of the monomer.somebody else tell me they are dimers.

i need a perfect result to show only one correct band at right MW,

So,Is there any methods to remove the dimer?
should I change the conditions of treating samples? for example , boiling to 60 degree C and cool down slowly?
Or doing the non-reduced PAGE?
Or subcelluar separation ?
Or change the detergent,for example ,Triton X-100?


And ,i don't think it was glycoprotein,although many dimers are found glycosylated,it is unusual to found transcript factors glycosylated,isn't it?


Thanks for any response

I'd be a bit surprised if a TF was covalently dimerised, or glycosylated for that matter. I'd be a bit worried about your reduction step though. Try with a bit more bME, and fresh loading buffer like Missele suggested

-swanny-