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TA cloning-Insert size too big? - (Feb/26/2006 )

Hi, I am current trying to clone a PCR fragment of 2.1kb into pGEM-T easy (3kb). Have tried a few times without success (little or no white colonies). The ligation buffer and ligase are both fine (I did a different ligation and it worked fine). The vector is brand new. and there is no apparent fault with the insert (purified and amount judging from the gel is OK). I am wondering if the insert is too big for the vector to handle. I should mention I have cloned two 1kb genes using the same method successfully (so no exonuclease chopping off the A). Can anyone shed some light on this? Thanks

-robotcl-

The insert is probably not too big for the vector. I would try different insert:vector ratios. For me, 5:1 - 3:1 worked well. Make sure your bacteria are competent and the insert has an A-overhang. smile.gif

-chalet2-

i've cloned 7kb in such vector

-fred_33-