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Difference between SNP and point mutation - (May/31/2005 )

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What is the difference between an SNP and a Point mutation? When is it called an SNP and when is it called a point mutation? mellow.gif

-kavitha-

QUOTE (kavitha @ May 31 2005, 09:26 AM)
What is the difference between an SNP and a Point mutation? When is it called an SNP and when is it called a point mutation?  mellow.gif

A SNP is a polymorphic base where the point mutation has persisted in the population. The term point mutation can occur as a one off event in only one individual. Generally, SNP studies look for bases that have greater than a certain minor allele frequency (e.g. 10% of the population have the minor allele) to show that the SNP is informative and exists in several individuals in a population.

-kwing-

point mutation as the name implies has a delatrious or severe affect on the individual and is responsible for maybe premature termination of a message generating an aberant protein or no protein at all.

SNP's do not have this affect.

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-methylnick-

Thank you kwing and methylnick for the info.
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-kavitha-

Actually SNPs can have an affect on the individual, sometimes severe, for instance many cancers show SNPs in them, I would call that a severe effect!

bob

-bob1-

QUOTE (bob1 @ Jun 9 2005, 09:38 PM)
Actually SNPs can have an affect on the individual, sometimes severe, for instance many cancers show SNPs in them, I would call that a severe effect!

bob


So then its still called an SNP even if it causes severe effects, since its present only in certain percentage of the population? huh.gif

-kavitha-

bob1,

that's interesting! can you lead me to some references that show this?? Cheers

Nick

-methylnick-

Hi,

Here's a pretty good and simple website explaining SNP. Hope this helps.

http://www.ornl.gov/sci/techresources/Huma.../faq/snps.shtml

-Spate-

Sure does, tnaks spate!

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-methylnick-

Nice website, and damn precise too. We normally use the >1% criteria as a golden std. for when to call it a SNP and not a mutation. A mutation though also covers deletions/ insertions, SNPs dosent. I dont totally agree on the assumption about that a SNP cant be disease causing, it probably wont be a dominant disease causing SNP but perhaps recessive. ? Anyway SNPs are newbies in this game and we still lacks alot of information about those babies. smile.gif

-hollegaard-

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