Protocol Online logo
Top : Forum Archives: : Bioinformatics and Biostatistics

local or global alignment - (Oct/15/2008 )

would it b better for me to use local or global alignment if i have both partial and complete sequences to compare.
I have 2 partial sequences and 5 full lengths.
I want to compare their amino acids and nucleotide similarities.....thankS!

-heidi-

QUOTE (heidi @ Oct 16 2008, 01:20 PM)
would it b better for me to use local or global alignment if i have both partial and complete sequences to compare.
I have 2 partial sequences and 5 full lengths.
I want to compare their amino acids and nucleotide similarities.....thankS!


DNAman is really a good tool for multi-alignment locally.

hope this helps

stone

-stone757-