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Protein precipitation. Overdrying proteins - (Apr/25/2008 )

Hello,

I have a question about protein precipitation. I precipitate my proteins with methanol and chloroform. The final step is that I wash my pellets with methanol (1ml). Because of the fragility of the pellet I put it in all in the speed vac and dry the pellet. What could happen with the proteins when I overdry the pellet. After drying I resuspend the pellet with 2x sample buffer. When I loaded the protein on the SDS-PAGE I observed that in the bottom of the tube a residue is visible. Something viscous or the like. Is this the overdried pellet and the proof that not everything was properly resuspended?
Thanks for all comments.
Tiffy

-Tiffy-

QUOTE (Tiffy @ Apr 25 2008, 12:26 AM)
Hello,

I have a question about protein precipitation. I precipitate my proteins with methanol and chloroform. The final step is that I wash my pellets with methanol (1ml). Because of the fragility of the pellet I put it in all in the speed vac and dry the pellet. What could happen with the proteins when I overdry the pellet. After drying I resuspend the pellet with 2x sample buffer. When I loaded the protein on the SDS-PAGE I observed that in the bottom of the tube a residue is visible. Something viscous or the like. Is this the overdried pellet and the proof that not everything was properly resuspended?
Thanks for all comments.
Tiffy


it is not recommended to dry protein pellets totally as re-solubility even in SDS_PAGE sample buffer is decreased; total drying may favour hard-soluble aggregations; if you used total lysate and did not treat with DNAse you may observed traces of DNA, or lipids

-The Bearer-

But how can I remove methanol without destroying my fragile pellet? The proteins stem from a nucleus fraction. I want to load 50µg protein. But to load this amount I have to pipette about 70µl volume. I am little bit helpless.
Any suggestions?
Thanks
Tiffy

-Tiffy-

QUOTE (Tiffy @ Apr 25 2008, 03:52 AM)
But how can I remove methanol without destroying my fragile pellet? The proteins stem from a nucleus fraction. I want to load 50µg protein. But to load this amount I have to pipette about 70µl volume. I am little bit helpless.
Any suggestions?
Thanks
Tiffy


for a reagent cup, after centrifugation, pour away methanol and let it dry by air for half an hour, the opening upside down; some minor traces of methanol may be left but this does not matter; then boil it in SDS sample buffer

-The Bearer-