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BLAT serach program for beginners - How to interpret results (Sep/14/2006 )

Hi evry1, I'm an undergraduate student doing final year thesis project concerning bioinformatics. i cam across this program (BLAT) in the net. the big problem is i dont know hw 2 interpret the results, can any1 help me?????????

-Gollum-

I'm not familiar with the program. What does the output look like? What information are you trying to find for which you've settled on BLAT?

-HomeBrew-

QUOTE (HomeBrew @ Sep 14 2006, 08:04 PM)
I'm not familiar with the program. What does the output look like? What information are you trying to find for which you've settled on BLAT?


thnx 4 replyin. actually It's a new tool developed by Kent at UCSC. the output i have attached in a word doc file below. the problem is with interpreting the side side by alignment. Attached File

-Gollum-