please suggest a program to compare promoter seuences - promoter sequences (May/22/2006 )
I am wondering if anyone could suggest a way to compare 40 promoter sequences to identify some common elements in these promoter sequences. These results have come up after a promoter array analysis and i will really like to identify some common elements in them, to see whether i can identify a new binding site???????
I think Vector NTi from invitrogen could do it. The program is free.
Doesn't really work on Safari, so try on PC.