Which software you proffer to use for haplogroup distributions among populations - (Apr/07/2006 )
Which software you proffer to use for haplogroup distributions among populations by mtDNA data?
-Abror-
QUOTE (Abror @ Apr 7 2006, 05:09 AM)
Which software you proffer to use for haplogroup distributions among populations by mtDNA data?
Try DnaSP or Arlequin.
Arlequin was specially designed for mtDNA haplotype analysis, initially.
-L_Han-
Thanks L Han, We just have started to analysis our Central Asia populations. Please assist us how we can get specific dates of haplogrops ( for example D, F, G, I, A, T, M....). Or Arlequin has all data?
QUOTE (L_Han @ Apr 9 2006, 02:43 AM)
QUOTE (Abror @ Apr 7 2006, 05:09 AM)
Which software you proffer to use for haplogroup distributions among populations by mtDNA data?
Try DnaSP or Arlequin.
Arlequin was specially designed for mtDNA haplotype analysis, initially.
-Abror-
Check out the Arlequin documentation here
http://anthro.unige.ch/arlequin/
The author of the program is Excoffier. You should either do a PubMed search on the author or follow the references in the program documentation.
From what i remember, you have to define your haplotypes- it doesn't recognize them by default.
-L_Han-