How to define the domans in protein sequence - (Jan/28/2009 )
How can I define the domains in my protein sequence. I blast search but i did not find as much infromation as I was expecting.
I shall be very thankful to you for your kind reply.
there are a number of search tools for domains grouped at ExPASy (http://www.expasy.ch/tools/) - Pattern and profile searches
If its a NRPS or PKS, try this:
Try ELM database search. It gives the domains and potential binding partners.