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Chip-Seq data analysis - (Jun/18/2014 )

Dear All,


I have Chip-Seq data in bed format, I would like to analyse my data , can someone please tell me , how can I analyse my data online, does anyne know  which company provides online tool or software  to carry out this kind of work. 


Waiting for your reply.


Thanks and regards


-Sid Sam-

Can try Galaxy.


Or on Linux- Tophat, Cuffliink, Cuffdiff