Protocol Online logo
Top : New Forum Archives (2009-): : SDS-PAGE and Western Blotting

Protein amount to load for publication figure? - (May/10/2013 )

I need a figure of a SDS-PAGE gel with a couple different purified proteins. I tend to overload gels because I am just checking quality and size and just load "a few microliters". How much (in ug) protein should be loaded per well? Each sample is pure (only 1 protein) and I am looking to get a normal size band that is more intense than the ladder, but not overwhelming.

Thanks

JM

-HOYAJM-

For standard Coomassie staining, I generally load about 2ug of a singular purified protein per well. You should get a crisp dark band. In my experience, if you go much over 5ug your band will start to become more blob and less band.

-Missle-

how are you going to stain the gel?

if you use coomassie then you want 1-5ug (depends on the size of the protein, width of the well, thickness of the gel, etc).

if you stain with silver then no more than ~100ng.

-mdfenko-

If you have enough of your purified protein, can't you just run several lanes each with a different amount of protein and then pick the amount that gives you the best image?

-Tom M-

Thanks for the suggestions. I will be coomassie staining on a 1mm gel. The sizes are 20 & 70 KDa. I will try the 2ug and see how that goes

-HOYAJM-