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Real Time PCR polymerase enzyme - (Mar/11/2012 )

hi guys


A typical TaqMan protocol contains a denaturation step followed by a combined annealing and extension step at 55–60°C, instead of the traditional three-step PCR cycle of denaturation, annealing, and extension. my question is, does combined temperature affects Taq polymerase efficiency? and which Taq polymerase we use for Taqman Real Time assay?

-Mehdi-

Is it a homework question?
What types of Taq polymerase do you know if you're saying "which Taq"?

-Trof-

At least, it should have a 5' to 3' exonuclease activity for TaqMan assays.

The lower temperature will affect the TaqPol, the velocity of extension will be decreased (this is one reason why you should keep real-time PCR products short).

-tea-test-

tea-test on Mon Mar 12 12:59:09 2012 said:


At least, it should have a 5' to 3' exonuclease activity for TaqMan assays.

The lower temperature will affect the TaqPol, the velocity of extension will be decreased (this is one reason why you should keep real-time PCR products short).


Thank you so much. your post answered my question.

-Mehdi-