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rendering position-weight matrixs into logos - (Mar/02/2011 )

Hi all,

Does anyone have some good software for rendering a position-weight matrix into an image? I just have a PMW, not an alignment... thanks.

-microphobe-

microphobe on Wed Mar 2 08:32:13 2011 said:


Hi all,

Does anyone have some good software for rendering a position-weight matrix into an image? I just have a PMW, not an alignment... thanks.


You can use seqLogo package from R / Bioconductor.

Regards,
Christian.

-CHODAR-