predict union between microRNAs and genes - (Feb/14/2011 )
I want to study how the different microRNAs of a virus are able to change the expression of cellular RNA.
For these reason, I would like to find a programme or a database in order to predict different union between virus microRNAs and cellular RNAs.
I would be very pleased if you could help me!
Thanks in advance!
I don't quite understand your question: whether you want to identify mRNA targets for those miRNAs or to find coexpression of the miRNAs and a set of mRNA?
targetscan, miRanda, PITA, pictar,...
there's a lot of miRNA target prediction tools.