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Research Tools
- SNP PCR-RFLP Assay Design (Ruifang Zhang et al, University of Chicago)
The SNP Cutter is a web-based application that batches and automates assay design for SNP genotyping using PCR-RFLP.
http://bioinfo.bsd.uchicago.edu/SNP_cutter.htm
Added: Mon Jan 09 2006, Hits: 987, Reviews: 0 Write review Cached -
Haplotype Analysis - Haplotype Resolution (HPA)
(Eran Halperin and Eleazar Eskin, UC Berkely)
HAP takes as input a set of genotypes over a region, taken from a population, and returns the haplotype phase of each of the individuals' genotypes.
http://research.calit2.net/hap/WebServer.htm
Added: Wed Jan 11 2006, Hits: 393, Reviews: 0 Write review Cached -
Restriction of DNA sequences
(Joseba Bikandi)
A set of scripts for restriction digest of DNA. Three os the scripts are suitable for SNP Analysis: 1)Compare restriction patterns of two sequences for SNP/Mutation detection, 2) Compare restriction patterns of multiple prealigned sequences, 3) SNP detection with mutagenic primers. By using SNP ID, forms are filled automatically.
http://www.in-silico.com/restriction/
Added: Mon Jan 09 2006, Hits: 524, Reviews: 0 Write review Cached