|
Western Blot Analysis for Tissue | |
| Author: | Dang Vu Hoang |
| Source: | Laboratory of Vet.Biochemistry and Molecular Biology, Chungbuk National University, Republic of Korea |
| Date Added: | Tue May 10 2005 |
| Date Modified: | Wed May 11 2005 |
1. Protein extraction
-Preparation of Tissue: 10-20 mg
-Homogenize sample in 0.6 ml PRO-PREP solution by using homogenizer.
-Incubate at –200C for overnight.
-Centrifuge at 14.000 rpm for 10 mins at 40C and transfer supernatant to a fresh tube (1.5 ml tube).
2. Protein measurement
-Prepare sample solution: 50 ml
2 ml Protein plus 48 ml DW (dilution factor: 2)
-Prepare 1X Pro-Measure solution: Dilute 1 part of 10X Pro-Measure solution by adding 9 parts of DW. Vortex sufficiently.
-Add 500 ml 1X Pro-Measure solution into 50 ml sample solution. Vortex sufficiently.
-Incubate for 2-5 mins at RT.
-Measure absorbance at 595 nm (500 ml).
-Adjust Protein concentration: 6 mg/ml.
-Re-measure.
Note:
-Blank: 50 ml DW plus 500 ml 1X Pro-Measure solution.
-Pro-Measure solution on glass cuvette surface can be removed by EtOH (or MtOH).
3. Adjustment of Protein concentrations: (For Western Blot: 20-60 mg) by using DW.
4. Denaturation of sample:
-Sample plus DW/ sample buffer=4/1
For example: Sample plus DW=10 ml/ sample buffer=2.5 ml.
-Denature at 850C for 5 mins and chill on ice for 5 mins.
Preparation of the gel
Resolving Gel Stacking Gel
| 30% Acrylamide | 3.3 ml | 0.65 ml |
| Resolving Buffer | 2.5 ml |
|
| Stacking Buffer |
| 4.3 ml |
| DW | 4.1 ml |
|
| 10% APS | 200 ml | 50-60 ml |
-Pour the resolving gel to about 1 cm below the well of the comb.
-Seal with 400 ml DW. This step can stop here and leave the gel for overnight.
-When the resolving gel has set (about 15-30 mins), pour off DW.
-Pour the stacking gel and insert the comb immediately.
-When the stacking gel has set (about 40 mins), remove the comb and wash the well with DW.
-Place the gel in the gel rig and immerse in running buffer.
Running gel:
-Load sample into the well.
-Run with constant current (80 Volt) for 65 mins (60-70 mins)
Preparation of Membrane
-Cut a piece of the membrane: 8.5 cm x 4.5 cm
-Filter paper: 9.5 cm x 6 cm
Membrane transfer
-Membrane should be wetted in Methanol and transfer into transfer buffer.
-Pre-wet the sponges, filter paper (slightly bigger than gel) in transfer buffer. And keep the gel, membrane and filter paper at 100C for 10 mins before transfer.
Sponge – Filter paper – Gel – Membrane – Filter paper – Sponge
-Transfer for 3 hours at 300 mA or overnight at 30 mA
Blocking membrane
-Let membrane dry at RT about several hours. Membrane should be wetted in Methanol before blocking.
-Block membrane in 5% Skim Milk (0.25g skim milk in 5 ml PBS-T) for overnight with shacking at 80 rpm.
Antibody Incubation
-Wash the membrane 3 times with PBS-T for 10 mins/each time
-Incubate the membrane with primary antibodies diluted 1/500 in Blocking Buffer (10 ml/5 ml PBS-T containing 250 mg skim milk) for 1 hour at RT with shacking at 80 rpm.
-Wash the membrane 3 times with PBS-T for 10 mins/each time
-Incubate the membrane with secondary antibodies diluted 1/3000 in Blocking Buffer (1.75 ml/5 ml PBS-T containing 250 mg skim milk) for 1 hour at RT with shacking at 80 rpm.
-Wash the membrane 3 times with PBS-T for 10 mins/each time.
-Incubate the membrane with chromogen (the ratio: 1/1)
-Expose to X-ray films for 30 sec and 1 min.
Reagents and Chemicals
5X Sample Buffer: 10 ml
| 1M Tris-HCl (pH: 6.8) | 0.6 ml (60 mM) |
| 50% Glycerol | 5 ml (25%) or 2.5 ml |
| 10% SDS | 2 ml (2%) |
| 2-Mercaptoethanol | 0.5 ml (14.4 mM) |
| 1% Bromophenol Blue | 1 ml (0.1%) |
| DW | 0.9 ml or 3.4 ml |
Filtration and storage at –200C
PBS-T:
One table per 100 ml DW plus 50 ml Tween 20.
Skim Milk (or BSA)
250 mg skim milk per 5 ml PBS-T.