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DELETEMYACCOUNTPLEASE

Member Since 27 Jan 2009
Offline Last Active Sep 27 2012 12:16 PM
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#140662 How to use available Bioperl data to build evolutionary software?

Posted DELETEMYACCOUNTPLEASE on 04 September 2012 - 12:17 PM

right, you aren't aiming low then?  If you are going to be making use of bioperl then i suspect you are going to want to use some modules to do things like fetching a parsing data - eg going to NCBI and pulling down a load of .fasta files, parsing out the sequences and building some phylogenetic trees, sequence alignments etc.  You will find loads of this stuff in bioperl - the trick is mastering searching the bioperl repos - http://www.bioperl.o...i/Main_Page  is the best place to start.  I am not familiar with the state of Perl, cpan and bioperl but you should get your head around CPAN.   You should also take a look at perl moose, testing and *creating and using objects.

* i 100% hate OO perl - even with moose.

TRY HERE http://doc.bioperl.org/bioperl-live/


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