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rmbio

Member Since 26 Jan 2009
Offline Last Active Apr 16 2013 03:51 AM
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#146666 ChIP sonication

Posted rmbio on 13 December 2012 - 04:47 AM

I did not do any experiment after above attempt.
What's the marker size in your case?  I have consistently observed that if u load the sonicated samples directly (without phenol purifyling and having 1% SDS coming from lysis buffer in my case) onto the agarose gel, you get some weared pattern. I am sure you have done the same. So my suggesiton is that after RNase-proteinaseK incubation give phenol-chloroform treatment followed by alcohol (isopropanol or ethanol) precipitation and than load the samples on gel for analyzing the size.


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