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Biouday

Member Since 18 May 2011
Offline Last Active Feb 23 2012 03:35 PM
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#126864 Vascular Smooth Muscle cell Marker

Posted bob1 on 10 January 2012 - 12:37 PM

It seems that there is no one marker for smooth muscle, you may have to use more than one.  One paper I found recommended SMα-actin, SMC myosin heavy chain (SM-MHC), Calponin, SM22α, and H-caldesmon.


#125858 how many times striping can b done of the blot

Posted bob1 on 21 December 2011 - 12:01 PM

View PostBiouday, on 21 December 2011 - 03:39 AM, said:

Hi Bob, I like to know is it possible that small protein migrate through the membrane during transfer.
Definitely.  The pores in the membranes are much much larger (they are nearly the size of a bacterium) than any proteins you are likely to be detecting on a western.  The liklihood of a protein migrating through depends on the membrane and transfer system you are using.

View Postpakbiochemist, on 21 December 2011 - 11:30 AM, said:

Dear Friends
i have blot 50 ug of histone protein and the transfer was overight at 30mAmp. I dddnt go for ponceau stain and directly add blocking sol followed by primary Ab.
My stripping solution is
100mM mercapto ethanol
10% SDS
1M Tris pH 6.7
water
How amny times can i strip y blot. and also advice me regarding the time for  transfer  of proteins from gel to membrane. & if anyone can share a paper regarding molecular weight and Ab concentration to b used and also the transfer rates of different proteins

Regards
Binsan
If you loaded only histone proteins, you won't see any other proteins, so why bother trying to detect them?  If you actually loaded 50 ug of total cell lysate (as I suspect), then it may be worth stripping.  Personally I disapprove of stripping, as you don't know how this affects the proteins that are on the membrane, and potentially alters any results you might have, unless you are very careful to keep the stripping conditions consistent.

You can't tell if the transfer has gone correctly, unless you ponceau stained the membrane.  If you have consistently been able to transfer proteins using this method before, then you can be reasonably sure that you will have protein on the membrane.  IIRC histones are likely to be able blow through the membrane as they are reasonably small (approx 15 kDa).

Your stripping will work, but you should determine the number of times you can do it for yourself.  I would estimate that a maximum of 2 times (detect 3 proteins) would be about the limit!


#125192 Help in RE digestion of vector

Posted Chakchel on 10 December 2011 - 06:32 AM

Please give us further information.

How did you set up the reaction?
Which enzymes are you talking about?


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