Dr. shakibaie mrMember Since 11 Nov 2009
Offline Last Active Jul 24 2012 11:56 PM
Name: Mohammad Reza
Surname/Family name: Shakibaie
Date of birth: 23/8/1964
Place of birth: Kerman/Iran
Fax :0098 341 3226171
Academic E‐mail: firstname.lastname@example.org
Ph.D: University Of Pune, India.
Years Attended: 1992-1997.
Major Fields Of Study: Molecular Bacteriology & Biotechnology.
Title Of Ph.D. thesis: Molecular Genetics Of Plasmid Mediated Silver & Antibiotic Resistance in Acinetobacter baummannii
Fellowship: Aquatic Microbial Lab. Mysore, India
Year Attended: 2006
05]Title: Horizontal transfer of antibiotic resistance genes among
05] gram negative bacteria in sewage and lake water and influence of some physico‐chemical parameters of water on conjugation process
Permanent Position: Faculty Member/Associate Professor
Institute / University: Kerman University Of Medical Sciences
Department / faculty: Microbiology & Immunology
Current Research: Molecular Biology/Antibiotic Resistant genes/Biofilm
Membership in Scientific Societies
Member, New York Academy of Science, science advisory board (USA)
Member, Asian ‐Pacific research foundation for infectious diseases (ARFFID)Affiliated member of European Society for Microbiologists (FEMS)
Member of Iranian Society of Microbiology
Editorial board World Academy of Sciences (Waset)
Editor of Int. J. Biol. Life. Sci.
Editorial team J Biotechnology and Molecular Biology Review
Editor of Current Research Journal of Biological Sciences
Editor J Bacteriology Research
Member Iranian biotechnology society
The focal point of the research in our lab are plasmid mediated antibiotic and metal resistance, Biofilms formation and its genes in hospital isolates of P.aeruginosa and also enhancing bioremediation of heavy metals using genetic engineering organisms, the enzyme that is responsible for the first step in gene expression, cloning some genes responsible for Biofilms formation and also we are using genetic engineered bacteria for decreasing the CO2 emission. All these steps are subject to elaborate control by numerous regulatory proteins and small effectors.
M.Sc. Students thesis
1-Study on Curing of antibiotic resistance plasmids using Iranian plant extracts.
2-Study on Antibiotic sensitivity of pseudomonas aeruginosa isolated from burn patients.
3- Study on resistance of pseudomonas aeruginosa to chromium & copper and their biotechnological implications on bioremediation of heavy metals.
4- Study on antibiotic resistance, beta lactamase production and plasmid profile of Neisseria gonorrheae strains.
5- Study on isolation, species distribution, antibacterial resistance pattern and Beta-lactamase production of enterococci isolated from human samples in southeast of Iran.
6- Study on Myrtus extracts and its anti-supercoiling DNA (Co-worker).
7- Study on prevalence of Plasmids & its relation to Beta-lactemase in Staphylococcus aureus.
8- Study on mechanism of metal resistance in Pseudomonas aeroginosa.
9- Study on antibiotic resistance pattern of Enterococci species isolated from human and chicken alimentary channels.
10- Study on mechanism of Myrtus plant extract on supercoiling of Plasmid PBR322 in E.coli k12 HB101.
11- Study on Plasmid mediated cefotaxime and ceftizoxime resistance in multiple antibiotic resistance Klebsiella pneumonieae isolated from hospitals in Kerman, Iran.
12-Study on antibiotic resistance, Beta-lactamase production, plasmid profile of N.gonorrhoea isolated from patients with urtheritis.
13-Study on Prevalence of conjugative plasmids in E.coli strains isolate from hospitals.
14-Study on detection of MBL/ESBL B-lactomases in Pseudomonas aeruginosa isolated from burn patients in Kerman,Iran.
15-Bioremediation of cadmium (Cd) using Cd resistant bacteria isolated from activate sludge industrial waste effluent in batch bed reactor.
16-Detection of SHV, PER, and TEM type of ESBL genes among Pseudomonas aeruginosa isolated from burn patients in Shafa ‐ hospital Kerman, Iran.
17- Detection of thermophilic metal resistance bacteria from Kerman hot springs
18- Biofilm formation and plasmid mediated antibiotic resistance among clinical isolates of Proteus species isolated from Afzalipoor hospital, Kerman, Iran.
M.Sc students working with me: At present one M.Sc student.
1‐ Molecular profiling of ESBL genes of Pseudomonas aeruginosa isolated from burn Patients using RFLP‐Sequencing techniques.
2‐ Study of antibiotic resistance and ESBL production in Acinetobacter strains isolated from hospitals in Kerman, Iran.
3- Antibiotic sensitivity and kind of bacteria isolates from children unit of Afzalipoor hospital, Iran
1- Molecular identification and synetic of biosorption of CU and Ni by thermophilic bacteria isolated from Deymand hot spring, Kerman, Iran. (Submitted)
2- Ehsan Mirkamandar, Mohammad Reza Shakibaie, Saeed Adeli, Mitra Mehrabani, Mohammad Mehdi Hayatbakhsh. In vitro antimicrobial activity of Salvadora persica extract on Helicobacter pylori strains isolated from duodenal ulcer biopsies. Microbiology Research. Volume 3:e9: 38-41 (2012).
3- Mohammad Reza Shakibaie et al. Antibiotic resistant pattern and ESBL production among Acinetobacter spp. isolated from ICU of a hospital in Kerman, Iran. Antibiotic resistance infection control. 1 (1):1-8 (2012)
4- K Mozafari Nia, G Sepehri, H Khatmi, M.R. Shakibaie. Isolation and antimicrobial susceptibility of bacteria from chronic supportive otitis media patients in Kerman, Iran. Iranian Red Crescent Medical Journal, 13(12):891-894 (2011).
5‐ Shakibaie M.R. and Moradie M. Detection of Carbenicillin hydrolyzing (CARB) type of ESBL in hospital isolates of Acinetobacter baumannii. Int. Journal Biol & Biomed Sci. 1(1):1‐6 (2011).
6‐ Fershteh Shacheraghi, Mohammad Reza Shakibaie, Hanieh Noveiri. Molecular identification of ESBL genes blaGES‐1, blaVEB‐1, blaCTX‐M blaOXA‐1, blaOXA‐4, blaOXA‐10 and blaPER‐1 in Pseudomonas aeruginosa isolated from burn patients by PCR‐RFLP and sequencing techniques. Int Journal Biol & Life Sci. 6 (3): 138‐142, (2010).
7‐ A. Jabbari Nezhad Kermani, M. Faezi Ghasemi A. Khosravan A. Farahmand and M. R. Shakibaie. Bioremediation of cadmium (Cd) using Cd resistant bacteria isolated from activate sludge industrial waste effluent in batch bed reactor. Iran. J. Environ. Health. Sci. Eng. 7(4): 279‐286 (2010).
8‐ Shakibaie M.R., Dhakephalker P.A., Kapadnis B.P., and Chopade B.A. Removal of silver from Waste water effluents using Acenitobacter baumannii BL54. Canadian Journal Microbiology. 45:995‐1000 (1999). (37 citations) (book citation)
9‐ M.R. Shakibaie, K.A. Jalilzadeh and S.M. Yamakanamardi. Horizontal transfer of antibiotic resistance genes among gram negative bacteria in sewage and lake water and influence of some physico‐chemical parameters of water on conjugation process J. Environ. Biol. 30(1):45‐49 (2009). (4 citations)
10‐ M.R. Shakibaie, Pershant Dhakephalker, Balu Parnab Kapadnis, Balu Ananda Chopade. Conjugational transfer and survival of plasmid encoding silver and antibiotic resistance genes of Acinetobacter baumannii BL54, E.coli K12 J53.2 transconjugants and pseudomonas transformants in different soil microcosms. Journal of Bacteriology Research 1(7): 79‐84 (2009).
11‐ M.R. Shakibaie, Kyvan Shams, Mohammad Khalili. Detection of Legionella pneumophila in Cooling Water Systems of Hospitals and Nursing Homes of Kerman City, Iran by Semi‐Nested PCR. Int. J. Biol. Life. Sci. 5(1): 1‐4 (2009).
12‐ Shakibaie M.R., Ardebili A., Aali S., Ketabchi A., Shahabinejad N. Antibiotic resistance, β‐ lactamase production and plasmid profile of Neisseria gonorrhea strains isolated from urethritis and cervicitis patients in Kerman, Iran. Eastern Mediterranean health journal [EMRO] [WHO] to be published in (2009).
13- Shakibaei M.R., Shah cheraghi Fereshteh,Hashemi ALI,Saeid Adeli N.A. Detection of TEM, SHV AND PER type extended-spectrum 8-lactamase genes among clinical strains of pseudomonas aeruginosa isolated from burnt patients at sbafa-hospital, KERMAN, IRAN. Iranian Journal of Basic Medical Sciences. 2008; 11(2 (38)):104-111.
14‐ M.R. Shakibaie, A. Khosravan, A. Frahmand, S. Zare. Application of metal resistant bacteria by mutational enhancement technique for bioremediation of copper and zinc from industrial Wastes. Iran. J. Environ. Health. Sci. Eng. 5 (4): 251‐256 (2008). (2 citations)
15‐ Abbas Mohammadi, Ali Vaziri Gohar and Mohammad Reza Shakibaie. Mutations in Tumor Suppressor TP53 Gene in Formalin‐ Fixed, Paraffin Embedded Tissues of Squamous Cell Carcinoma (SCC) of Lung Cancer. American Journal of Biochemistry and Biotechnology. 4 (1): 1‐ 6 (2008).
16‐ Shakibaie MR, Ardebili A, Alii SH, Ketabchi AA, Shahabinejad N. Antibiotic Resistance, β‐Lactamase Production and Plasmid Profile of Neisseria gonorrhoeae Strains Isolated from Urethritis and Cervicitis Patients in Kerman, Iran. Medical Journal of Tabriz University of Medical Sciences. 30 (3): 13 (2008).
17‐ Mansouri S., Shakibaie M.R., Mahbob S. Isolation species distribution, antibacterial resistance pattern and Beta‐lactamase production of enterococci isolated from human samples in southeast of Iran. Iranian Journal Medical Sciences. 30(2): 68‐72 (2005).
18- Gholamhoseinian A., M.R. Shakibaie and Z. Jamali. The mechanism of antibacterial effect of methanolic extract of green Myrtus communis on E.coli K12 HB101. J Rafsanjan Univ. Med. Sci. Health Serv. 4: 220-227 (2005).
19‐ Mohammad Reza Shakibaie and Ali Harati. Metal accumulation in Pseudomonas aeruginosa Occur in the form of nanoparticles on the cell surface. Iranian Journal of Biotechnology. 2(1):55‐60 (2004). (Book citation +1citation)
20‐ Shakibaie M.R., Dhakephalker B.A., Kapadnis B.P and Chopade B.A. Silver resistance in Acinetobacter baumannii BL54 occurs through binding to a Ag‐Binding Protein. Iranian Journal of Biotechnology. 1 (1): 41‐46 (2003). (18 citations)
21‐ Shakibaie M.R., Ehsan Z.H. Conjugative Plasmids among Antibiotic resistance Escherichia Coli isolates from hospitals in Kerman, Iran. Modarres journal of Medical Sciences. 6(2): 75‐83 (2003).
22‐ Shakibaie M.R. Plasmid mediated metal and antibiotic resistance in Pseudomonas aeruginosa Strains isolated from burn patients. Medical Journal of the Islamic Republic of Iran.16 (3):159‐ 163 (2002).
23‐ Kiani MA, Shakibaie M.R. Kariminejad M.H. A 22;22 Robertsonian translocation in patient with repeated abortions. Arch Irn Med; 3(3):151‐153, (2000).
24‐ Shakibaie M.R., Adeli S., Nikian Y. Emergence of Ciprofloxacin resistance among Pseudomonas aeruginosa isolated from burn patients. Iranian Journal of Medical Sciences. 26 (3&4): 155‐159, (2001).
25‐ Shakibaie M.R., Mansouri S., Hakak S. Plasmid Pattern of antibiotic resistance in β‐lactamase producing Staphylococcus aureus isolated from hospitals in Kerman, Iran. Arch Irn, Med.2 (2):93‐97 (1999). (4 citations)
26‐ Shakibaie MR, Dhakephalker P, Salajaghe G.A, Chopade BA. Plasmid mediated silver & antibiotic resistance in Acinetobacter baumannii BL54. Iranian Journal of medical sciences, 23 (1&2):30‐36 (1998). (21citations)
ABSTRACTS IN SEMINARS
1‐ Shakibaie M.R. Antibiotic resistance among Pseudomonas aeruginosa exhibit different RFLP with regards to gyrA gene. Proceedings of The second national biotechnology Congress, Islamic Republic of Iran. Agricultural Biotechnology Research Institute of Iran. Oct.9‐11, (2001), Karaj. (Invited speaker)
2‐ Shakibaie M.R: Gene therapy of monogenic diseases, new approach to genetics. 10thIranian Genetics Congress. 21‐23 May, (2008) Tehran, Iran. Pp‐401. (Invited speaker)
3‐ Shakibaie M. R., Shams K., Khalili M: 16SRDNA PCR amplification and semi‐nested PCR for detection of Legionella pneumophila in cooling water systems of different hospitals and nursing homes of Kerman, Iran. 10th Iranian Genetics Congress. 21‐23 May, (2008) Tehran, Iran. Pp‐403.
4‐ Shakibaie M.R. et al: Detection of ESBL genes and their heterogeneity in Pesudomonas aeruginosa isolates. 3rd Conference of European Microbiologist (FEMS 2009) Gothenburg, Sweden June 28‐July 2, 2009.pp1396
5‐ Shakibaie M.R et al: Horizontal transfer of antibiotic resistance genes among gram negative bacteria in sewage and lake water and effect of some physicochemical of water in conjugation. 3rd Conference of European Microbiologist (FEMS 2009) Gothenburg, Sweden June 28‐July 2, 2009.pp139
6‐ Shakibaie MR; plasmid‐encoded resistance to penicillin’s in Acinetobacter baumannii BL54 mediated by carbenicillin‐hydrolysing (carb) type of β‐lactamase: 8th International Symposium on the Biology of Acinetobacter1 – 3 September 2010 Università di Roma Tre, Rome, Italy.
7- Shakibaie MR: Molecular identification of ESBL genes blaGES‐1, blaVEB‐1, blaCTX‐M blaOXA‐1, blaOXA‐4, blaOXA‐10 and blaPER‐1 in Pseudomonas aeruginosa isolated from burn patients by PCR‐RFLP and sequencing techniques. 4th Conference of European Microbiologist (FEMS 2011). Geneva, SWISS
8- Shakibaie MR: Bioremediation of cadmium (Cd) using Cd resistant bacteria isolated from activate sludge industrial waste effluent in batch bed reactor. 4th Conference of European Microbiologist (FEMS 2011). Geneva, SWISS
Application of Advanced Molecular Methods for Diagnosis of Human Genetic Diseases. 13-17 September, 2004, Tehran, Iran.
1- Basic Molecular Genetics. (1998).
2- Biotechnology and recombinants DNA technology.2003 (Translated from English to Persian).
Title Principle of Basic Molecular Bacteriology
Description: This book briefly describes the basic molecular bacteriology including bacterial chromosome, molecular techniques used in bacteriology, quorum sensing, Bacterial signal transduction, gene transfer among bacteria in the natural environment, mitochondrial DNA, Index and References……...
Primary Category Science / General
Publication Date October 4 2009
Authored by Dr Mohammad Rza ‐ Shakibaie Ph.D.
- Group Members
- Active Posts 2
- Profile Views 643
- Member Title member
- Age 46 years old
- Birthday April 9, 1967
Ehsan Mirkamandar, Mohammad Reza Shakibaie, Saeed Adeli, Mitra Mehrabani, Mohammad Mehdi Hayatbakhsh. In vitro antimicrobial activity of Salvadora persica extract on Helicobacter pylori strains isolated from duodenal ulcer biopsies. Microbiology Research. Volume 3:e9: 38-41 (2012).
Mohammad Reza Shakibaie et al. Antibiotic resistant pattern and ESBL production among Acinetobacter spp. isolated from ICU of a hospital in Kerman, Iran. Antibiotic resistance infection control. 1 (1):1-8 (2012)
My research interests
molecular bacteriology, Biofilm