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a layer of lipids floating on the supernatant


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#1 BioBus

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Posted 22 July 2009 - 05:20 AM

HI,
after sonication, and centrifuge with top speed for 30 min
at 4 degree,
there is a layer of lipids floating on the supernatant..


How you treat them?

Certainly I cannot ignore them , but no idea how they
produced and how to further proceed.

They seems definitively among the useless for IP .

thx,

Bus

#2 KPDE

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Posted 22 July 2009 - 12:24 PM

View PostBioBus, on Jul 22 2009, 06:20 AM, said:

HI,
after sonication, and centrifuge with top speed for 30 min
at 4 degree,
there is a layer of lipids floating on the supernatant..


How you treat them?

Certainly I cannot ignore them , but no idea how they
produced and how to further proceed.

They seems definitively among the useless for IP .

thx,

Bus


I usually just ignore the small pellicle that I get after centrifugation. If you think it might be a problem then you could always increase the ratio of sonication buffer to cells. Of course this means you have to sonicate a larger volume so, if you do this, you might want to split your lysate into two aliquots before sonicating.

#3 bob1

    Hmmm, I think it's working

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Posted 22 July 2009 - 04:41 PM

Just remove the solution from under the lipid layer to a new tube. Or, conversely take the lipid layer off the tube and discard, it shouldn't contain anything of importance for your IP.





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