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3d structure


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5 replies to this topic

#1 MOFT

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Posted 08 May 2009 - 11:09 AM

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks

#2 T C

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Posted 08 May 2009 - 09:01 PM

Hey,

Try threading using genthreader to get structural homologues.
http://bioinf.cs.ucl...ed/psiform.html
Go for fold recognition.

Best,
TC

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks



#3 DELETEMYACCOUNTPLEASE

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Posted 10 May 2009 - 11:09 AM

Hey,

Try threading using genthreader to get structural homologues.
http://bioinf.cs.ucl...ed/psiform.html
Go for fold recognition.

Best,
TC

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks


PSIPRED doesn't do the prediction - it simple finds folds.

try here: http://salilab.org/modeller/

#4 biochemi

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Posted 03 August 2009 - 02:39 AM

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks

You can use swiss protpdb viewer its easy to use

#5 cellcounter

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Posted 03 August 2009 - 08:51 AM

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks

You can try out many protein structure prediction tools.

#6 Biointelligence

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Posted 05 August 2009 - 11:42 PM

Hi
You may have a look at JPred or PredictProtein.

Best Luck !!
Biointelligence
biointelligence.wordpress.com




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