Jump to content

  • Log in with Facebook Log in with Twitter Log in with Windows Live Log In with Google      Sign In   
  • Create Account

Submit your paper to J Biol Methods today!
Photo
- - - - -

Gene expression heat map ?

Heat map

  • Please log in to reply
2 replies to this topic

#1 Mohamed 1984

Mohamed 1984

    Veteran

  • Active Members
  • PipPipPipPipPipPipPipPipPipPip
  • 110 posts
7
Neutral

Posted 08 October 2015 - 07:31 AM

Dear Al,

 

I have a list of miRNAs with their log2 FC and P values, and want to create a classic heat map for better visualization. Could zou provide me with a simple tool or software, other than R, to do this ? 

I also wonder if any one of you know if cytoscape package contains such a program ? 

 

Thanks 



#2 bob1

bob1

    Thelymitra pulchella

  • Global Moderators
  • PipPipPipPipPipPipPipPipPipPip
  • 6,540 posts
548
Excellent

Posted 08 October 2015 - 11:46 AM

Try MeV.



#3 jennifer_ph

jennifer_ph

    member

  • Members
  • Pip
  • 4 posts
0
Neutral

Posted 23 April 2018 - 08:58 PM

Hi! If you're still searching for it, give BioVinci a try. It works for my gene expression heatmap. You can customize the clustering method, and also the colors.

 

Hope this helps! And here it is: https://vinci.bioturing.com/

hca+%281%29.png






Home - About - Terms of Service - Privacy - Contact Us

©1999-2013 Protocol Online, All rights reserved.