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Prediction tool to search for translation start codon

translation start codon atg

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#1 cancerous



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Posted 14 January 2014 - 10:38 AM

HI all,


I need an easy-to-use, web-based free Prediction tool to search for eukaryotic translation start codon from nucleotide sequence.


I want a tool that can find canonical start codon ATG as well as alternative codons such as CTG.


Can anyone suggest me good tool? Thanks!



#2 bob1


    Thelymitra pulchella

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Posted 14 January 2014 - 11:43 AM

I don't know if most of them can find alternative start codons, but most sequence analysis tools can do this.  I use ApE (A plasmid Editor) which is free (though not web based).


Also have a look at the tools here

#3 mdfenko


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Posted 15 January 2014 - 05:08 AM

you may also find a web based tool at expasy.org/genomics (maybe codon suite?).

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