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Prediction tool to search for translation start codon

translation start codon atg

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#1 cancerous

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Posted 14 January 2014 - 10:38 AM

HI all,

 

I need an easy-to-use, web-based free Prediction tool to search for eukaryotic translation start codon from nucleotide sequence.

 

I want a tool that can find canonical start codon ATG as well as alternative codons such as CTG.

 

Can anyone suggest me good tool? Thanks!

 

 



#2 bob1

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Posted 14 January 2014 - 11:43 AM

I don't know if most of them can find alternative start codons, but most sequence analysis tools can do this.  I use ApE (A plasmid Editor) which is free (though not web based).

 

Also have a look at the tools here



#3 mdfenko

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Excellent

Posted 15 January 2014 - 05:08 AM

you may also find a web based tool at expasy.org/genomics (maybe codon suite?).


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