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How to set options "G" and "F" in MrBayes

bioinformatics phylogeny MrBayes

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#1 pwang521



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Posted 28 August 2013 - 05:13 AM

It was recommended by ProtTest that the following two options are chosen:

(a) assigning each site a probability to belong to given rate categories;
(B) considering observed amino acid frequencies.

The problem is that I don't know how to set it in commands in mb.

Please help me. Thanks!

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