Software Suggestions - Short Peptides
Posted 01 October 2012 - 08:03 PM
Posted 02 October 2012 - 04:53 PM
have you tried the expasy tools for protein structure?
Thanks for this list, and I did look at I-TASSER after your post. I have determined values for what I was looking for but unfortunately for such short peptides they are not very insightful. I now would like to model these peptides into the protein of interest to help explain my findings. Unfortunately, I am in over my head with these programs (pyMol, autodock, to name a few) and I am looking for simple tutorials to get me started as I have no background in protein 3D modeling. Any links to literature, websites, tutorials, would be greatly appreciated.