from my experimental gene list, I find quite a number of genes which have predicted binding sites (analyzed with RSAT matrix scan tool) for two TFs in which I am particularly interested. Moreover, most of the time these binding sites are quite close together (ranging from a few bases up to about 700 bp).
So now I would like to know if this observation is statistically significant, but I don't really have an idea how to do this.
Hope somebody can help me with this.
Co-localization of TFBS
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