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Problem in Vector-Insert digestion result


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#1 aravinthkumarj

aravinthkumarj

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Posted 07 June 2012 - 06:37 PM

Hi,
I cloned 1.4kb insert DNA into my 5.7kb vector. I got colonies and my colony PCR also showed positive results.
But when I digested the cloned plasmid, my result was strange. I got my insert (1.4kb) exactly but the vector was around 4kb.
I used pET15b vector and the restriction sites are overlapping one.
Please let me know what could be the problem?

Thanks.
Aravinth.

#2 biocrazy

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Posted 07 June 2012 - 06:49 PM

Are you sure there is no other restriction site in the vector for the enzymes that you used?

If yes, it may undergone a non-specific digestion at some other place in the vector. You can try again by reducing the incubation time.

Good luck!!




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