I am a relatively new qPCR user. I started with an applied biosystems machine and I did about 5 standard curves with a bunch of primers till I realized that oops, my dillutions were off! Then I got things working well, and I got standard curves with good efficiencies -3.3--> -3.6. Then our department got 2 new BioRad machines that are across the hall. I thought I would switch over. I'm using a fast mix from applied biosystems. I tried a standard curve with the same primers and the efficiencies were much lower. I thought maybe it was my cDNA quality - so I used a kit for RNA and got great ratios with nanodrop for RNA. The efficiencies were a bit better - but still above 3.6. I spoke to the rep from BioRad and he suggested doing a gradient for annealing temp for the primers to find the best temp for this mix on their machine - I feel like that will waste a lot of reagent and time. Does anyone have any tips?? If not I might just go back to the old machine (even though its two floors down and you have to sign up in advance).
Thanks!
Standard curve issues
Started by yaeldeb, Mar 01 2012 04:35 AM
primer callibration machines standard curve
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