WHat issues do we have to aware of when desingin SNPS in a diagnostic testting for clinical diaggnosis?
How do we find the SNPS
and if we find hem do they have to be redesiggned everytime because what if you can't move the primer?
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designing prirmers with SNPS for diagnostic clinical use
Started by nervous scientist, Nov 18 2011 06:37 PM
1 reply to this topic
#2
Ameya P
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Rervm Cognoscere Cavsas
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Posted 22 November 2011 - 09:28 PM
NS,
Could you please explain more elaborately on what you are looking for?
I guess for a clinical setting, you would know the SNPs from research papers and also get the primers for them from the same source. The SNP can have three possibilities, AA, AB or BB. So your protocol should be able to tell you, which SNP is present. You could use an ARMS set up, RFLP, or sequencing to figure out what zygosity exists.
Could you please explain more elaborately on what you are looking for?
I guess for a clinical setting, you would know the SNPs from research papers and also get the primers for them from the same source. The SNP can have three possibilities, AA, AB or BB. So your protocol should be able to tell you, which SNP is present. You could use an ARMS set up, RFLP, or sequencing to figure out what zygosity exists.
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