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How can I find genomic sequence of a transcript

Started by humalog, May 05 2011 12:28 AM

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#1 humalog

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Posted 05 May 2011 - 12:28 AM

Hi
I haven't used bioinformatics for a bit so I need some memory refreshement.

I know how to find the nt sequence of a transcript. (on NCBI Nucleotide)
But how can I find the genomic sequence that codes for it (in other words the sequence on the genome that encodes it)?
Specifically I need this, so I can find the flanking sequences of a gene.

#2 NicoBxl

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Posted 19 May 2011 - 12:04 AM

use ensembl biomart

http://www.ensembl.o...9a2e33876767c0d
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