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real time pcr tm and ct of negative controls


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#1 ginger

ginger

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Posted 16 February 2011 - 02:28 AM

hi everyone i'm new to real time pcr.i have transfected cells with a plasmid containing cmv promoter after rna extraction with high quality(checked with nanodrop)i did a two step rt-pcr without dnase treatment albeit.i got these results how could it be explained? is there a contamination?
thanx
noRT tm 77.96  ct 31.83
ntc(to check dimer-primer) tm 77.58     ct 29.86
untransfected   tm   77   ct 35.94
mock  tm       77     ct 33.86
transfected     tm 78.91   ct   31.01
transfected duplicate tm 78.34  ct 30.5
analyzing with 7500 system shows an increased 113 fold expression after transfection
my expected band should be between 65-70bp,here is my gel unfortunately it is not perfect

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