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Problem with arlequin software


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#1 TMals

TMals

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Posted 09 August 2010 - 04:27 AM

Hi

i have some difficulties in built up the input file for Arlequin software , i did 7 restriction enzyme treatment for 100 sample
can i estimat the frequency for each haplotype via arlequin ?
how should i define my samples ?

when i enter this input file the program gave me an error message , can you help me please ?



[Profile]
NbSamples=1
DataType=RFLP
GenotypicData=0
GameticPhase=1
LocusSeparator=WHITESPACE
RecessiveData=0
MissingData='?'
Frequency= ABS # - {ABS, REL}
FrequencyThreshold= 1.0e-5 # - (Any real number, usually between 1.0e-7 and 1.e-3)
EpsilonValue= 1.0e-7 # - (Any real number, usually between 1.0e-12 and 1.0e-5)

[Data]

[[HaplotypeDefinition]]

HaplListName="HFSTP "





HaplList={
( what should i write here , the each restriction enzyme result ot the total for llels) ?
.

}

[[Samples]]

SampleName="S"
SampleSize= 100
SampleData= { ( how should i define the sample data ) ?

}


thanks a lot in advance




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