Can you search a database for a particular sequence motif? For instance, I want to search a protein database for proteins that contain the motif "RKDA". Is there any way to do this?
Or the other way around... Is it possible to look for a specific motif within a protein sequence? I know you can do this in web tools like Prosite or Pfam... But what about when your motif is not defined in any of these databases?
Thanks in advance.
Looking for a particular motif within proteins
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