Search homologus sequences
Posted 17 November 2009 - 07:56 PM
I want to search whether a particular inverted repeat sequence present in the promoter region of E.coli gene is also present in other species of bacteria. Since it is just a 20bp long region, I dont know how to use NCBI blast option guide me pls . I thank all of you..
"Support Bacteria, they are the only cultures some people have"
Posted 20 November 2009 - 03:40 PM
I don't think there's actually going to be an easy way to do this
there are also promoter analysis softwares available which can calculate probabilities about your sequence being involved with the promoter based on neighboring sequences...? is that what you're looking for?