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Incomplete denaturing with 8M urea?


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#1 theprawn

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Posted 13 November 2009 - 02:31 PM

Does anyone have any experience with proteins that will not denature in 8M urea? It appears I have several ORFs that are expressed but when I lyse with 8M urea they stay with the pellet. I don't need native structure. I purify on a Ni-NTA column. Any suggestions on coaxing them out?

#2 mdfenko

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Posted 18 November 2009 - 12:53 PM

you could try adding some 2-mercaptoethanol to break up disulfide bonds.
talent does what it can
genius does what it must
i do what i get paid to do

#3 dxm

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Posted 01 December 2009 - 02:34 AM

1. beta-mercap
2. + SDS
3. +SDS+beta-mercap+boil for 10min (like what u do in SDS-PAGE) :angry:

I think boiling will destroy the native structure, if it do not totally destroy the protein.

#4 braincow

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Posted 03 December 2009 - 08:00 AM

If you're going to boil it, don't do it in urea lysis buffer unless you don't care about carbamylation. You could try using a urea-thiourea lysis buffer if your ORF is fairly hydrophobic.





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