Hi all,
I would have a few questions regarding isolation of proteins localized in plasma membrane and/or cytoskeleton.
The protein of my interest should be anchored in plasma membrane (it should pass membrane by several domains). However, when I do subcellular fractionation using different commercially available kits, I always detect the protein in cytoskeleton and never in any membrane fraction. Or when I perform separation of triton x-100 soluble-insoluble fraction, the protein is in triton insoluble fraction (cytoskeletal proteins). A subcellular localization using immunofluorescence microscopy I can not do, since antibodies against this protein are not very specific (I detect many additional bands).
My questions:
1. is it possible that protein is really anchored in plasma membrane/passing plasma membrane, but because it also interacts with some cytoskeletal proteins it is always in cytoskeleton fraction?
2. there are structures called focal adhesion in cell - proteins connecting cytoskeleton with extracellular matrix. May be the protein interacts in plasma membrane with focal adhesion proteins. If I would separate cytoskeleton proteins (e.g. using triton x-100) the focal adhesion proteins would be mainly in triton insoluble (cytoskeleton) or soluble fraction?
3. Do you have any ideas, how I can get to know whether the protein is really in plasma membrane?
Thanks in advance.
Best regards,
Vic
Isolation of plasma membrane, focal adhesion and cytoskeleton proteins
Started by victor.m, Oct 01 2009 02:54 AM
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