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ChIP and Next Generation Sequencing
Please also visit archived discussions on the topic of ChIP (1999-2009) and ChIP (2009-Present), sonication issues (sonication 1 and sonication 2) and ChIP-Seq in the ChIP Forum
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Shearing (sonication) problem for ChIPStarted by timjim, 10 Jun 2009  sonication, shearing, chip
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How to analyze ChIP PCR dataStarted by krystle, 13 Feb 2011 ChIP, data analysis, result and 1 more...
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Purify ChIP DNA using Qiagen spin filterStarted by epigenetics, 30 Nov 2009 |
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What do people use as sequencing control in ChIP-SeqStarted by TracyDuke, 28 Jul 2009 |
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Sonication Vs MNaseStarted by Dukey, 14 Apr 2011 |
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chromatin shearing using Bioruptor sonicatorStarted by thammiey, 14 Feb 2011 |
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help regarding ChIP assay after sonication with bioruptorStarted by varma_ran, 07 Dec 2010 |
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Samples for ChIP-seq library preparationStarted by doudou30, 22 Apr 2010 |
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% INPUT - ChIPStarted by dna_nerd, 05 Feb 2009 |
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Is my antibody ChIP grade?Started by nigelcr, 10 Mar 2010 |
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ChIP Foaming and other woes (archived)Started by bioforum, 31 Jan 2009 |
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ChIP - Foaming in sonication and other woesStarted by badcell, 27 Jan 2005 |
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How to analyze ChIP data for histone modificationsStarted by suncokret, Yesterday, 05:55 AM |
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Do I need to have a biological replicate for sequencing VirusStarted by Mohamed 1984, 09 Apr 2014 |
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Cycle number and number of reads with NGS technologies. What do they mean!?Started by firefly2280, 17 Mar 2014 |
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double crosslinking in PBS or medium?Started by Txaio83, 19 Mar 2014 chip, double crosslinking, PBS
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How to concentrate chromatin prior to IP?Started by Brenna, 19 Mar 2014 ChIP, chromatin shearing
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Low RNA quantity after on column DNAse digestionStarted by Mohamed 1984, 04 Mar 2014 |
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ChIP positive control not workingStarted by jennuottawa, 19 Feb 2014 |
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Help learning about RNA-seq data analysis.Started by Wek, 27 Feb 2014 |
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Barcodes with Illumina MiSeqStarted by LabNerd, 22 Oct 2013 |
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16S / NGS and BacillusStarted by firefly2280, 27 Feb 2014 |
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Checking RNA integrity by Denaturing GelStarted by Mohamed 1984, 26 Feb 2014 |
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Need help on RNA preparation for RNA sequencingStarted by Trys, 18 Dec 2013 RIN value above 9
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measuring in log baseStarted by molbio1234, 16 Feb 2014 |
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