This is a cached page for the URL ( Silanized Slides). To see the most recent version of this page, please click here.
Protocol Online is not affiliated with the authors of this page nor responsible for its content.
About Cache
Sectioning and Mounting Protocols for Glycolmethacrylate Embedding Kits from Energy Beam Sciences

Sectioning and Mounting Protocol

Technovit Glycol Methacrylate: Technical Information and Help From Heraeus Kulzer.


Sectioning is best done with a rotary or sledge microtome such as the JB-4 Microtome. The features to look for are retraction of the specimen on the return stroke and motorized motion of the sample relative to the knife edge. Retraction is needed to keep the hard sample from brushing against the knife edge on the return stroke, damaging the edge and block face. Motorized sample movement is desirable to get more reproducible cutting speed and force.

The best sections are obtained on these microtomes with a glass or tungsten carbide knife. Disposable tungsten carbide knives are available from Energy Beam Sciences which offer the ability to cut routine serial 1 micron thick sections. Dry block faces are used; in fact, moisture and humidity will soften GMA blocks sufficiently to make sectioning impossible. If the block is too soft to section dry the block in a warm oven or move to a less humid work environment.

Sections are collected from the knife edge using tweezers and stretched by floating on a water bath. Two factors are important when preparing the water bath: cleanliness and temperature. Any residue of soap or oil will decrease the surface tension of the water dramatically reducing its stretching ability and/or causing the section to sink. Increasing temperature also reduces the stretching ability of the bath so that at 20 C stretching of 10 - 13% is possible while at 60 C stretching of 7 - 9% is possible. Section stretching allows recovery of almost all the compression caused during sectioning. Properly stretched, much less than 1% of the compression in vertical dimension remains in the sections.

Most procedures call for mounting your sections on slides before staining. The exception may be when staining sawn sections since these retain enough strength to be held in tweezers and hand-dipped in the various staining solutions (followed directly by coverslipping to slides). Mounting thinner sections to slides before staining also helps to prevent folds from developing in the sections. If you are using slides precoated with silane, skip the protocol for coating your own.

Preparing Silanized Slides


The silane material comes in a liquid form from Sigma. The full name is 3,aminopropyltriethoxysilane.


  1. Dip slides in 2% silane/acetone solution for one minute.
  2. Dip slides in 100% acetone for one minute.
  3. Dip slides in double distilled water for one minute.
  4. Repeat step 3 with agitation.
  5. Air dry.
  6. Apply sections on a drop of water on the slide.
  7. Dry on 60C hot plate for 2 - 5 minutes.
  8. Air dry at room temperature overnight.

These silanized slides can be stored at room temperature for months without any problems.


Tobias Baskin, Univ. of Missouri, 109 Tucker Hall, Columbia, MO, Email:


Angerer, L. M. & Angerer, R. C. (1991) Localization of mRNAs by in-situ hybridization. Functional Organization of the Nucleus: a Laboratory Guide. Methods in Cell Biology, Vol 35, (ed. by B. A. Hamalko & S. C. R. Elgin), pp. 37-71. Academic Press, San Diego.


Dip your coated slide into the waterbath under the section and lift the section off the water surface. Dry the slides for about 15 minutes on a 60C slide warmer.

Additional Online Resources

Technovit Glycol Methacrylate Embedding Kits
Plastic Embedded Tissue: More Techniques and Protocols
Light Microscopy Supplies

Energy Beam Sciences, Inc.
11 Bowles Road Agawam, Massachusetts 01001-2925
Phone: 800-992-9037 or 413-786-9322 Fax: 413-789-2786