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ProPred. MHC Class-II Binding Peptide Prediction Server
Purpose: The aim of this server is to predict MHC Class-II binding regions in an antigen sequence, using quantitative matrices derived from published literature by Sturniolo et. al., 1999.  The server will assist in locating promiscuous binding regions that are useful in selecting vaccine candidates.

If you are using the results for publication, please cite:

Singh,H. and Raghava,G.P.S.(2001) ProPred: Prediction of HLA-DR binding sites. Bioinformatics,17(12), 1236-37.

Server statistics
SEQUENCE SUBMISSION FORM
Name of Antigen  (Optional):
Paste your sequences here:
Or submit sequence from file :
Input Sequence format:
Threshold (%) [1-10]
Allele:
Display top scorers:
Result Display Format:
For multiple selection
use alt key.
Prediction Method | MHC  and Prediction 
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