This is a cached page for the URL (http://www.molbiol.ru/eng/scripts/01_13.html). To see the most recent version of this page, please click here.
Protocol Online is not affiliated with the authors of this page nor responsible for its content.
About Cache
   6 frame translation | molbiol.ru   
molbiol.ru - main page.
 > Calculations >  Sequences > 6 frame translation.

6 Frame Translation.

Rambler's Top100
 

       Name (not necessary):  
       Nucleotide sequence without name:
    (case insensitive, all letters except agctuswrymkhbdvn are disregarded)


       

       Nucleotide sequence:
       Output: nucleotides in one line;
       display the initial sequence;
       display complementary sequence in 5' --> 3' direction;

       Translation:
       Output: aminoacids in one line, code:  
       Frame number:
        +1;     +2;     +3;     all
        -1;     -2;     -3;    


       Alignment:
       align amino acids sequences relative to nucleic acid.


    This program translate nucleic acid sequence. Rare codons may be displayed with "Search of rare codons in nucleotide sequence".

    For manipulations with nucleic acid sequence (reverse, reverse/complement, double stranded) it is possible to use Sequence Utilities program.

    Standard symbols for polymorph nucleotides:
    Sg,CHA,C,T
    WA,TBC,g,T
    RA,gDA,g,T
    YC,TVA,C,g
    MA,CNA,g,C,T
    Kg,T  


"Practical Molecular Biology" http://molbiol.ru/eng;
e-mail: editor@molbiol.ru

    Supplement.

    People who know! Some information, that you know, but the author did know (or forgot) is missed here. Your colleagues are using this page. Help them, please. Any information, which is helpful for the work are valuable.


    -- do not forget to mark, who is the author of the information! --   

Last modification: 04/01/03



to the beginning

      molbiol.ru - методы, информация и программы для молекулярных биологов    Rambler    Rating@Mail.ru    Be number one