Protocol Online logo
Top : Forum Archives: : Biochemistry

validating the efficiency of inhibitors of protein kinases A & G - (Oct/13/2007 )

Dear All
I have used inhibitors of protein kinases A & G (H89 and KT5823) at concentrations of 1, 2, and 5 microM on a human cancer cell line. the aim was to investigate whether the effects of a certain drug treatment involves PKA or PKG. Results obtained so far showed that these inhibitors did not modulate the drug treatment-induced changes in protein expression levels or promoter activities. Although the frequently used concentration of either inhibitors in previously published reports is 1 microM, what would be a suitable positive control to validate these findings and concluding that neither PKA nor PKG is involved?
comments are welcome
thanks

-yobou-

QUOTE (yobou @ Oct 13 2007, 05:55 AM)
Dear All
I have used inhibitors of protein kinases A & G (H89 and KT5823) at concentrations of 1, 2, and 5 microM on a human cancer cell line. the aim was to investigate whether the effects of a certain drug treatment involves PKA or PKG. Results obtained so far showed that these inhibitors did not modulate the drug treatment-induced changes in protein expression levels or promoter activities. Although the frequently used concentration of either inhibitors in previously published reports is 1 microM, what would be a suitable positive control to validate these findings and concluding that neither PKA nor PKG is involved?
comments are welcome
thanks


as your chosen inhibitors lack selectivity, it is absolutely necessary to demonstrate the effects on the molecular level; you may check specific transphosphorylation activity of PKA and PKG: design it for yourself (f.i. kemptide and radioactive ATP) or use a kit (ELISA, FRET-substrates etc),

or check specific cisphosphorylation activity with phospho-specific antibodies with IB

-The Bearer-

what are the specific inhibitors do you recommend?

-yobou-

QUOTE (yobou @ Oct 14 2007, 06:19 AM)
what are the specific inhibitors do you recommend?


I would also try KT5720 to inhibit PKA;

as these inhibitors were shown to have IC50 or Ki in the nanomolar range, they inhibit other kinases in the mikromolar range; to show the inhibition of PKA or PKG, it should be demonstrated by the aforementioned assays

-The Bearer-