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agarose gel electrophoresis - (Sep/06/2012 )

I forgot to add ethidium bromide in the molten agrose however i added the ethidium bromide to the running buffer...Will i be able to visualise the band, if not how caqn I rescue it. kindly let me know..
with regards

-siddharthsameer-

yes, it should be fine.

-bob1-

bob1 on Thu Sep 6 08:19:13 2012 said:


yes, it should be fine.

thanks i added 5µl of ethidium bromide to the running buffer but i am tensed wheether i will be able to see it since i have to cut the band for the ligation...are you sure it will be fine.. thanks for your reply..

-siddharthsameer-

I used to visualize my bands after migration with an immersion of the gel in a solution with a high concentration of ethidium bromide for about 30 minutes. That works fine! In the running gel, probably would be fine but I think it depends also on the concentration of your sample. So, what is the result?

-metionina-

metionina on Thu Sep 6 10:20:12 2012 said:


I used to visualize my bands after migration with an immersion of the gel in a solution with a high concentration of ethidium bromide for about 30 minutes. That works fine! In the running gel, probably would be fine but I think it depends also on the concentration of your sample. So, what is the result?

It worked perfectly fine :)

-siddharthsameer-

It should do... lots and lots of people do this around the world. Actually, all you need to do is add the EtBr to the +ve electrode end, it migrates in the opposite direction to DNA so will be drawn into the gel when running.

-bob1-